{ "_id": "6a22865bcd65a98ecbd53300", "Package": "AICcmodavg", "Type": "Package", "Title": "Model Selection and Multimodel Inference Based on (Q)AIC(c)", "Version": "2.3-4", "Date": "2025-03-03", "Authors@R": "person(given = c(\"Marc\", \"J.\"),\nfamily = \"Mazerolle\",\nrole = c(\"aut\", \"cre\"),\nemail = \"marc.mazerolle@sbf.ulaval.ca\",\ncomment = c(ORCID = \"0000-0002-0486-0310\"))", "Maintainer": "Marc J. Mazerolle ", "Description": "Functions to implement model selection and multimodel\ninference based on Akaike's information criterion (AIC) and the\nsecond-order AIC (AICc), as well as their quasi-likelihood\ncounterparts (QAIC, QAICc) from various model object classes.\nThe package implements classic model averaging for a given\nparameter of interest or predicted values, as well as a\nshrinkage version of model averaging parameter estimates or\neffect sizes. The package includes diagnostics and\ngoodness-of-fit statistics for certain model types including\nthose of 'unmarkedFit' classes estimating demographic\nparameters after accounting for imperfect detection\nprobabilities. Some functions also allow the creation of model\nselection tables for Bayesian models of the 'bugs', 'rjags',\nand 'jagsUI' classes. Functions also implement model selection\nusing BIC. Objects following model selection and multimodel\ninference can be formatted to LaTeX using 'xtable' methods\nincluded in the package.", "License": "GPL (>= 2)", "LazyLoad": "yes", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-05 08:13:02 UTC", "User": "root" }, "Author": "Marc J. Mazerolle [aut, cre]\n()", "Config/pak/sysreqs": "make", "Repository": "https://mamaz7.r-universe.dev", "Date/Publication": "2025-03-06 14:30:06 UTC", "RemoteUrl": "https://github.com/cran/AICcmodavg", "RemoteRef": "HEAD", "RemoteSha": "2a2da4a989635299104a7ae8ee36e0e86354b05c", "MD5sum": "c2e2cf6d8256c8e798eb8789c91da389", "_user": "mamaz7", "_type": "src", "_file": "AICcmodavg_2.3-4.tar.gz", "_fileid": "688cb5f6937d0c7c9049b157417996d3b8703179623788e4badddc05b0ee5d4d", "_filesize": 1720081, "_sha256": "688cb5f6937d0c7c9049b157417996d3b8703179623788e4badddc05b0ee5d4d", "_created": "2026-06-05T08:13:02.000Z", "_published": "2026-06-05T08:18:35.739Z", "_distro": "noble", "_jobs": [ { "job": 79689884804, "time": 257, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7431996211" }, { "job": 79689884748, "time": 257, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7431994728" }, { "job": 79689884862, "time": 260, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7431985838" }, { "job": 79689884780, "time": 240, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7431985895" }, { "job": 79689219558, "time": 278, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7431921789" }, { "job": 79689884810, "time": 129, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7431960018" }, { "job": 79689885163, "time": 244, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7431993059" }, { "job": 79689884855, "time": 227, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7431988500" }, { "job": 79689884790, "time": 208, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7431982497" } ], "_buildurl": "https://github.com/r-universe/mamaz7/actions/runs/27003462587", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/AICcmodavg", "_commit": { "id": "2a2da4a989635299104a7ae8ee36e0e86354b05c", "author": "Marc J. 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"title": "Flour Beetle Data", "topics": [ "beetle" ] }, { "page": "bictab", "title": "Create Model Selection Tables Based on BIC", "topics": [ "bictab", "bictab.AICaov.lm", "bictab.AICbetareg", "bictab.AICclm", "bictab.AICclmm", "bictab.AICcoxme", "bictab.AICcoxph", "bictab.AICfitdist", "bictab.AICfitdistr", "bictab.AICglm.lm", "bictab.AICglmerMod", "bictab.AICglmmTMB", "bictab.AICgls", "bictab.AICgnls.gls", "bictab.AIChurdle", "bictab.AIClavaan", "bictab.AIClm", "bictab.AIClme", "bictab.AIClmekin", "bictab.AIClmerMod", "bictab.AIClmerModLmerTest", "bictab.AICmaxlikeFit.list", "bictab.AICmer", "bictab.AICmultinom.nnet", "bictab.AICnlme.lme", "bictab.AICnlmerMod", "bictab.AICnls", "bictab.AICpolr", "bictab.AICrlm.lm", "bictab.AICsclm.clm", "bictab.AICsurvreg", "bictab.AICunmarkedFitColExt", "bictab.AICunmarkedFitDS", "bictab.AICunmarkedFitDSO", "bictab.AICunmarkedFitGDS", "bictab.AICunmarkedFitGMM", "bictab.AICunmarkedFitGOccu", "bictab.AICunmarkedFitGPC", "bictab.AICunmarkedFitMMO", "bictab.AICunmarkedFitMPois", "bictab.AICunmarkedFitOccu", "bictab.AICunmarkedFitOccuComm", "bictab.AICunmarkedFitOccuFP", "bictab.AICunmarkedFitOccuMS", "bictab.AICunmarkedFitOccuMulti", "bictab.AICunmarkedFitOccuRN", "bictab.AICunmarkedFitOccuTTD", "bictab.AICunmarkedFitPCO", "bictab.AICunmarkedFitPCount", "bictab.AICvglm", "bictab.AICzeroinfl", "bictab.default", "print.bictab" ] }, { "page": "bictabCustom", "title": "Create Model Selection Tables from User-supplied Input Based on (Q)BIC", "topics": [ "bictabCustom" ] }, { "page": "boot.wt", "title": "Compute Model Selection Relative Frequencies", "topics": [ "boot.wt", "boot.wt.AICaov.lm", "boot.wt.AICbetareg", "boot.wt.AICglm.lm", "boot.wt.AIChurdle", "boot.wt.AIClm", "boot.wt.AICmultinom.nnet", "boot.wt.AICpolr", "boot.wt.AICrlm.lm", "boot.wt.AICsclm.clm", "boot.wt.AICsurvreg", "boot.wt.AICvglm", "boot.wt.AICzeroinfl", "boot.wt.default", "print.boot.wt" ] }, { "page": "bullfrog", "title": "Bullfrog Occupancy and Common Reed Invasion", "topics": [ "bullfrog" ] }, { "page": "c_hat", "title": "Estimate Dispersion for Poisson and Binomial GLM's and GLMM's", "topics": [ "c_hat", "c_hat.default", "c_hat.glm", "c_hat.glmmTMB", "c_hat.merMod", "c_hat.vglm", "print.c_hat" ] }, { "page": "calcium", "title": "Blood Calcium Concentration in Birds", "topics": [ "calcium" ] }, { "page": "cement", "title": "Heat Expended Following Hardening of Portland Cement", "topics": [ "cement" ] }, { "page": "checkConv", "title": "Check Convergence of Fitted Model", "topics": [ "checkConv", "checkConv.betareg", "checkConv.clm", "checkConv.clmm", "checkConv.default", "checkConv.glm", "checkConv.glmmTMB", "checkConv.hurdle", "checkConv.lavaan", "checkConv.lmerModLmerTest", "checkConv.maxlikeFit", "checkConv.merMod", "checkConv.multinom", "checkConv.nls", "checkConv.polr", "checkConv.unmarkedFit", "checkConv.zeroinfl", "print.checkConv" ] }, { "page": "checkParms", "title": "Identify Parameters with Large Standard Errors", "topics": [ "checkParms", "checkParms.betareg", "checkParms.clm", "checkParms.clmm", "checkParms.coxme", "checkParms.coxph", "checkParms.default", "checkParms.glm", "checkParms.glmmTMB", "checkParms.gls", "checkParms.gnls", "checkParms.hurdle", "checkParms.lm", "checkParms.lme", "checkParms.lmekin", "checkParms.lmerModLmerTest", "checkParms.maxlikeFit", "checkParms.merMod", "checkParms.multinom", "checkParms.nlme", "checkParms.nls", "checkParms.polr", "checkParms.rlm", "checkParms.survreg", "checkParms.unmarkedFit", "checkParms.vglm", "checkParms.zeroinfl", "print.checkParms" ] }, { "page": "confset", "title": "Computing Confidence Set for the Kullback-Leibler Best Model", "topics": [ "confset", "print.confset" ] }, { "page": "countDist", "title": "Compute Summary Statistics from Distance Sampling Data", "topics": [ "countDist", "countDist.default", "countDist.unmarkedFitDS", "countDist.unmarkedFitDSO", "countDist.unmarkedFitGDS", "countDist.unmarkedFrameDS", "countDist.unmarkedFrameDSO", "countDist.unmarkedFrameGDS", "print.countDist" ] }, { "page": "countHist", "title": "Compute Summary Statistics from Count Histories", "topics": [ "countHist", "countHist.default", "countHist.unmarkedFitGMM", "countHist.unmarkedFitGPC", "countHist.unmarkedFitMMO", "countHist.unmarkedFitMPois", "countHist.unmarkedFitPCO", "countHist.unmarkedFitPCount", "countHist.unmarkedFrameGMM", "countHist.unmarkedFrameGPC", "countHist.unmarkedFrameMMO", "countHist.unmarkedFrameMPois", "countHist.unmarkedFramePCO", "countHist.unmarkedFramePCount", "print.countHist" ] }, { "page": "covDiag", "title": "Compute Covariance Diagnostic for Lambda in _N_-mixture Models", "topics": [ "covDiag", "covDiag.default", "covDiag.unmarkedFitPCount", "covDiag.unmarkedFramePCount", "print.covDiag" ] }, { "page": "detHist", "title": "Compute Summary Statistics from Detection Histories", "topics": [ "detHist", "detHist.default", "detHist.unmarkedFitColExt", "detHist.unmarkedFitGOccu", "detHist.unmarkedFitOccu", "detHist.unmarkedFitOccuComm", "detHist.unmarkedFitOccuFP", "detHist.unmarkedFitOccuMS", "detHist.unmarkedFitOccuMulti", "detHist.unmarkedFitOccuRN", "detHist.unmarkedFrameOccu", "detHist.unmarkedFrameOccuComm", "detHist.unmarkedFrameOccuFP", "detHist.unmarkedFrameOccuMS", "detHist.unmarkedFrameOccuMulti", "detHist.unmarkedMultFrame", "print.detHist" ] }, { "page": "detTime", "title": "Compute Summary Statistics from Time to Detection Data", "topics": [ "detTime", "detTime.default", "detTime.unmarkedFitOccuTTD", "detTime.unmarkedFrameOccuTTD", "print.detTime" ] }, { "page": "DIC", "title": "Computing DIC", "topics": [ "DIC", "DIC.bugs", "DIC.default", "DIC.jagsUI", "DIC.rjags" ] }, { "page": "dictab", "title": "Create Model Selection Tables from Bayesian Analyses", "topics": [ "dictab", "dictab.AICbugs", "dictab.AICjagsUI", "dictab.AICrjags", "dictab.default", "print.dictab" ] }, { "page": "dry.frog", "title": "Frog Dehydration Experiment on Three Substrate Types", "topics": [ "dry.frog" ] }, { "page": "evidence", "title": "Compute Evidence Ratio Between Two Models", "topics": [ "evidence", "print.evidence" ] }, { "page": "extractCN", "title": "Compute Condition Number", "topics": [ "extractCN", "extractCN.default", "extractCN.unmarkedFit", "print.extractCN" ] }, { "page": "extractLL", "title": "Extract Log-Likelihood of Model", "topics": [ "extractLL", "extractLL.coxme", "extractLL.coxph", "extractLL.default", "extractLL.lmekin", "extractLL.maxlikeFit", "extractLL.unmarkedFit", "extractLL.vglm" ] }, { "page": "extractSE", "title": "Extract SE of Fixed Effects", "topics": [ "extractSE", "extractSE.coxme", "extractSE.default", "extractSE.lmekin", "extractSE.lmerModLmerTest", "extractSE.mer", "extractSE.merMod" ] }, { "page": "extractX", "title": "Extract Predictors from Candidate Model List", "topics": [ "extractX", "extractX.AICaov.lm", "extractX.AICglm.lm", "extractX.AICglmerMod", "extractX.AICglmmTMB", "extractX.AICgls", "extractX.AIClm", "extractX.AIClme", "extractX.AIClmerMod", "extractX.AIClmerModLmerTest", "extractX.AICrlm.lm", "extractX.AICsurvreg", "extractX.AICunmarkedFitColExt", "extractX.AICunmarkedFitDS", "extractX.AICunmarkedFitDSO", "extractX.AICunmarkedFitGDS", "extractX.AICunmarkedFitGMM", "extractX.AICunmarkedFitGOccu", "extractX.AICunmarkedFitGPC", "extractX.AICunmarkedFitMMO", "extractX.AICunmarkedFitMPois", "extractX.AICunmarkedFitOccu", "extractX.AICunmarkedFitOccuComm", "extractX.AICunmarkedFitOccuFP", "extractX.AICunmarkedFitOccuMS", "extractX.AICunmarkedFitOccuMulti", "extractX.AICunmarkedFitOccuRN", "extractX.AICunmarkedFitOccuTTD", "extractX.AICunmarkedFitPCO", "extractX.AICunmarkedFitPCount", "extractX.default", "print.extractX" ] }, { "page": "fam.link.mer", "title": "Extract Distribution Family and Link Function", "topics": [ "fam.link.mer" ] }, { "page": "fat", "title": "Fat Data and Body Measurements", "topics": [ "fat" ] }, { "page": "gpa", "title": "GPA Data and Standardized Test Scores", "topics": [ "gpa" ] }, { "page": "ictab", "title": "Create Model Selection Tables from User-supplied Information Criterion", "topics": [ "ictab", "print.ictab" ] }, { "page": "importance", "title": "Compute Importance Values of Variable", "topics": [ "importance", "importance.AICaov.lm", "importance.AICbetareg", "importance.AICclm", "importance.AICclmm", "importance.AICclogit.coxph", "importance.AICcoxme", "importance.AICcoxph", "importance.AICglm.lm", "importance.AICglmerMod", "importance.AICglmmTMB", "importance.AICgls", "importance.AIChurdle", "importance.AIClm", "importance.AIClme", "importance.AIClmekin", "importance.AIClmerModLmerTest", "importance.AICmaxlikeFit.list", "importance.AICmer", "importance.AICmultinom.nnet", "importance.AICnegbin.glm.lm", "importance.AICnlmerMod", "importance.AICpolr", "importance.AICrlm.lm", "importance.AICsclm.clm", "importance.AICsurvreg", "importance.AICunmarkedFitColExt", "importance.AICunmarkedFitDS", "importance.AICunmarkedFitDSO", "importance.AICunmarkedFitGDS", "importance.AICunmarkedFitGMM", "importance.AICunmarkedFitGOccu", "importance.AICunmarkedFitGPC", "importance.AICunmarkedFitMMO", "importance.AICunmarkedFitMPois", "importance.AICunmarkedFitOccu", "importance.AICunmarkedFitOccuComm", "importance.AICunmarkedFitOccuFP", "importance.AICunmarkedFitOccuMS", "importance.AICunmarkedFitOccuMulti", "importance.AICunmarkedFitOccuRN", "importance.AICunmarkedFitOccuTTD", "importance.AICunmarkedFitPCO", "importance.AICunmarkedFitPCount", "importance.AICvglm", "importance.AICzeroinfl", "importance.default", "print.importance" ] }, { "page": "iron", "title": "Iron Content in Food", "topics": [ "iron" ] }, { "page": "lizards", "title": "Habitat Preference of Lizards", "topics": [ "lizards" ] }, { "page": "mb.gof.test", "title": "Compute MacKenzie and Bailey Goodness-of-fit Test for Single Season, Dynamic, and Royle-Nichols Occupancy Models", "topics": [ "mb.chisq", "mb.chisq.default", "mb.chisq.unmarkedFitColExt", "mb.chisq.unmarkedFitOccu", "mb.chisq.unmarkedFitOccuRN", "mb.gof.test", "mb.gof.test.default", "mb.gof.test.unmarkedFitColExt", "mb.gof.test.unmarkedFitOccu", "mb.gof.test.unmarkedFitOccuRN", "print.mb.chisq" ] }, { "page": "min.trap", "title": "Anuran Larvae Counts in Minnow Traps Across Pond Type", "topics": [ "min.trap" ] }, { "page": "modavg", "title": "Compute Model-averaged Parameter Estimate (Multimodel Inference)", "topics": [ "modavg", "modavg.AICaov.lm", "modavg.AICbetareg", "modavg.AICclm", "modavg.AICclmm", "modavg.AICcoxme", "modavg.AICcoxph", "modavg.AICglm.lm", "modavg.AICglmerMod", "modavg.AICglmmTMB", "modavg.AICgls", "modavg.AIChurdle", "modavg.AIClm", "modavg.AIClme", "modavg.AIClmekin", "modavg.AIClmerMod", "modavg.AIClmerModLmerTest", "modavg.AICmaxlikeFit.list", "modavg.AICmer", "modavg.AICmultinom.nnet", "modavg.AICnegbin.glm.lm", "modavg.AICpolr", "modavg.AICrlm.lm", "modavg.AICsclm.clm", "modavg.AICsurvreg", "modavg.AICunmarkedFitColExt", "modavg.AICunmarkedFitDS", "modavg.AICunmarkedFitDSO", "modavg.AICunmarkedFitGDS", "modavg.AICunmarkedFitGMM", "modavg.AICunmarkedFitGOccu", "modavg.AICunmarkedFitGPC", "modavg.AICunmarkedFitMMO", "modavg.AICunmarkedFitMPois", "modavg.AICunmarkedFitOccu", "modavg.AICunmarkedFitOccuComm", "modavg.AICunmarkedFitOccuFP", "modavg.AICunmarkedFitOccuMS", "modavg.AICunmarkedFitOccuMulti", "modavg.AICunmarkedFitOccuRN", "modavg.AICunmarkedFitOccuTTD", "modavg.AICunmarkedFitPCO", "modavg.AICunmarkedFitPCount", "modavg.AICvglm", "modavg.AICzeroinfl", "modavg.default", "print.modavg" ] }, { "page": "modavg.utility", "title": "Various Utility Functions", "topics": [ "formatCands", "formulaShort", "reverse.exclude", "reverse.parm" ] }, { "page": "modavgCustom", "title": "Compute Model-averaged Parameter Estimate from User-supplied Input Based on (Q)AIC(c)", "topics": [ "modavgCustom", "print.modavgCustom" ] }, { "page": "modavgEffect", "title": "Compute Model-averaged Effect Sizes (Multimodel Inference on Group Differences)", "topics": [ "modavgEffect", "modavgEffect.AICaov.lm", "modavgEffect.AICglm.lm", "modavgEffect.AICglmerMod", "modavgEffect.AICgls", "modavgEffect.AIClm", "modavgEffect.AIClme", "modavgEffect.AIClmerMod", "modavgEffect.AIClmerModLmerTest", "modavgEffect.AICmer", "modavgEffect.AICnegbin.glm.lm", "modavgEffect.AICrlm.lm", "modavgEffect.AICsurvreg", "modavgEffect.AICunmarkedFitColExt", "modavgEffect.AICunmarkedFitDS", "modavgEffect.AICunmarkedFitDSO", "modavgEffect.AICunmarkedFitGDS", "modavgEffect.AICunmarkedFitGMM", "modavgEffect.AICunmarkedFitGOccu", "modavgEffect.AICunmarkedFitGPC", "modavgEffect.AICunmarkedFitMMO", "modavgEffect.AICunmarkedFitMPois", "modavgEffect.AICunmarkedFitOccu", "modavgEffect.AICunmarkedFitOccuComm", "modavgEffect.AICunmarkedFitOccuFP", "modavgEffect.AICunmarkedFitOccuMS", "modavgEffect.AICunmarkedFitOccuMulti", "modavgEffect.AICunmarkedFitOccuRN", "modavgEffect.AICunmarkedFitOccuTTD", "modavgEffect.AICunmarkedFitPCO", "modavgEffect.AICunmarkedFitPCount", "modavgEffect.default", "print.modavgEffect" ] }, { "page": "modavgIC", "title": "Compute Model-averaged Parameter Estimate from User-supplied Information Criterion", "topics": [ "modavgIC", "print.modavgIC" ] }, { "page": "modavgPred", "title": "Compute Model-averaged Predictions", "topics": [ "modavgPred", "modavgPred.AICaov.lm", "modavgPred.AICglm.lm", "modavgPred.AICglmerMod", "modavgPred.AICgls", "modavgPred.AIClm", "modavgPred.AIClme", "modavgPred.AIClmerMod", "modavgPred.AIClmerModLmerTest", "modavgPred.AICmer", "modavgPred.AICnegbin.glm.lm", "modavgPred.AICrlm.lm", "modavgPred.AICsurvreg", "modavgPred.AICunmarkedFitColExt", "modavgPred.AICunmarkedFitDS", "modavgPred.AICunmarkedFitDSO", "modavgPred.AICunmarkedFitGDS", "modavgPred.AICunmarkedFitGMM", "modavgPred.AICunmarkedFitGOccu", "modavgPred.AICunmarkedFitGPC", "modavgPred.AICunmarkedFitMMO", "modavgPred.AICunmarkedFitMPois", "modavgPred.AICunmarkedFitOccu", "modavgPred.AICunmarkedFitOccuComm", "modavgPred.AICunmarkedFitOccuFP", "modavgPred.AICunmarkedFitOccuMS", "modavgPred.AICunmarkedFitOccuMulti", "modavgPred.AICunmarkedFitOccuRN", "modavgPred.AICunmarkedFitOccuTTD", "modavgPred.AICunmarkedFitPCO", "modavgPred.AICunmarkedFitPCount", "modavgPred.default", "print.modavgPred" ] }, { "page": "modavgShrink", "title": "Compute Model-averaged Parameter Estimate with Shrinkage (Multimodel Inference)", "topics": [ "modavgShrink", "modavgShrink.AICaov.lm", "modavgShrink.AICbetareg", "modavgShrink.AICclm", "modavgShrink.AICclmm", "modavgShrink.AICcoxme", "modavgShrink.AICcoxph", "modavgShrink.AICglm.lm", "modavgShrink.AICglmerMod", "modavgShrink.AICglmmTMB", "modavgShrink.AICgls", "modavgShrink.AIChurdle", "modavgShrink.AIClm", "modavgShrink.AIClme", "modavgShrink.AIClmekin", "modavgShrink.AIClmerMod", "modavgShrink.AIClmerModLmerTest", "modavgShrink.AICmaxlikeFit.list", "modavgShrink.AICmer", "modavgShrink.AICmultinom.nnet", "modavgShrink.AICnegbin.glm.lm", "modavgShrink.AICpolr", "modavgShrink.AICrlm.lm", "modavgShrink.AICsclm.clm", "modavgShrink.AICsurvreg", "modavgShrink.AICunmarkedFitColExt", "modavgShrink.AICunmarkedFitDS", "modavgShrink.AICunmarkedFitDSO", "modavgShrink.AICunmarkedFitGDS", "modavgShrink.AICunmarkedFitGMM", "modavgShrink.AICunmarkedFitGOccu", "modavgShrink.AICunmarkedFitGPC", "modavgShrink.AICunmarkedFitMMO", "modavgShrink.AICunmarkedFitMPois", "modavgShrink.AICunmarkedFitOccu", "modavgShrink.AICunmarkedFitOccuComm", "modavgShrink.AICunmarkedFitOccuFP", "modavgShrink.AICunmarkedFitOccuMS", "modavgShrink.AICunmarkedFitOccuMulti", "modavgShrink.AICunmarkedFitOccuRN", "modavgShrink.AICunmarkedFitOccuTTD", "modavgShrink.AICunmarkedFitPCO", "modavgShrink.AICunmarkedFitPCount", "modavgShrink.AICvglm", "modavgShrink.AICzeroinfl", "modavgShrink.default", "print.modavgShrink" ] }, { "page": "multComp", "title": "Create Model Selection Tables based on Multiple Comparisons", "topics": [ "multComp", "multComp.aov", "multComp.default", "multComp.glm", "multComp.gls", "multComp.lm", "multComp.lme", "multComp.lmerModLmerTest", "multComp.mer", "multComp.merMod", "multComp.negbin", "multComp.rlm", "multComp.survreg", "print.multComp" ] }, { "page": "newt", "title": "Newt Capture-mark-recapture Data", "topics": [ "newt" ] }, { "page": "Nmix.gof.test", "title": "Compute Chi-square Goodness-of-fit Test for N-mixture Models", "topics": [ "Nmix.chisq", "Nmix.chisq.default", "Nmix.chisq.unmarkedFitDS", "Nmix.chisq.unmarkedFitDSO", "Nmix.chisq.unmarkedFitGDS", "Nmix.chisq.unmarkedFitGMM", "Nmix.chisq.unmarkedFitGPC", "Nmix.chisq.unmarkedFitMMO", "Nmix.chisq.unmarkedFitMPois", "Nmix.chisq.unmarkedFitPCO", "Nmix.chisq.unmarkedFitPCount", "Nmix.gof.test", "Nmix.gof.test.default", "Nmix.gof.test.unmarkedFitDS", "Nmix.gof.test.unmarkedFitDSO", "Nmix.gof.test.unmarkedFitGDS", "Nmix.gof.test.unmarkedFitGMM", "Nmix.gof.test.unmarkedFitGPC", "Nmix.gof.test.unmarkedFitMMO", "Nmix.gof.test.unmarkedFitMPois", "Nmix.gof.test.unmarkedFitPCO", "Nmix.gof.test.unmarkedFitPCount", "print.Nmix.chisq" ] }, { "page": "pine", "title": "Strength of Pine Wood Based on the Density Adjusted for Resin Content", "topics": [ "pine" ] }, { "page": "predictSE", "title": "Computing Predicted Values and Standard Errors", "topics": [ "predictSE", "predictSE.default", "predictSE.gls", "predictSE.lme", "predictSE.lmerModLmerTest", "predictSE.mer", "predictSE.merMod", "predictSE.unmarkedFitPCO", "predictSE.unmarkedFitPCount" ] }, { "page": "salamander", "title": "Salamander Capture-mark-recapture Data", "topics": [ "salamander" ] }, { "page": "summaryOD", "title": "Display Model Summary Corrected for Overdispersion", "topics": [ "print.summaryOD", "summaryOD", "summaryOD.glm", "summaryOD.glmerMod", "summaryOD.maxlikeFit", "summaryOD.multinom", "summaryOD.unmarkedFitColExt", "summaryOD.unmarkedFitDS", "summaryOD.unmarkedFitDSO", "summaryOD.unmarkedFitGDS", "summaryOD.unmarkedFitGMM", "summaryOD.unmarkedFitGOccu", "summaryOD.unmarkedFitGPC", "summaryOD.unmarkedFitMMO", "summaryOD.unmarkedFitMPois", "summaryOD.unmarkedFitOccu", "summaryOD.unmarkedFitOccuComm", "summaryOD.unmarkedFitOccuFP", "summaryOD.unmarkedFitOccuMS", "summaryOD.unmarkedFitOccuMulti", "summaryOD.unmarkedFitOccuRN", "summaryOD.unmarkedFitOccuTTD", "summaryOD.unmarkedFitPCO", "summaryOD.unmarkedFitPCount", "summaryOD.vglm" ] }, { "page": "tortoise", "title": "Gopher Tortoise Distance Sampling Data", "topics": [ "tortoise" ] }, { "page": "turkey", "title": "Turkey Weight Gain", "topics": [ "turkey" ] }, { "page": "useBIC", "title": "Computing BIC or QBIC", "topics": [ "useBIC", "useBIC.aov", "useBIC.betareg", "useBIC.clm", "useBIC.clmm", "useBIC.coxme", "useBIC.coxph", "useBIC.default", "useBIC.fitdist", "useBIC.fitdistr", "useBIC.glm", "useBIC.glmmTMB", "useBIC.gls", "useBIC.gnls", "useBIC.hurdle", "useBIC.lavaan", "useBIC.lm", "useBIC.lme", "useBIC.lmekin", "useBIC.lmerModLmerTest", "useBIC.maxlikeFit", "useBIC.mer", "useBIC.merMod", "useBIC.multinom", "useBIC.nlme", "useBIC.nls", "useBIC.polr", "useBIC.rlm", "useBIC.survreg", "useBIC.unmarkedFit", "useBIC.vglm", "useBIC.zeroinfl" ] }, { "page": "useBICCustom", "title": "Custom Computation of BIC and QBIC from User-supplied Input", "topics": [ "useBICCustom" ] }, { "page": "xtable", "title": "Format Objects to LaTeX or HTML", "topics": [ "xtable.aictab", "xtable.anovaOD", "xtable.bictab", "xtable.boot.wt", "xtable.checkParms", "xtable.countDist", "xtable.countHist", "xtable.detHist", "xtable.detTime", "xtable.dictab", "xtable.ictab", "xtable.mb.chisq", "xtable.modavg", "xtable.modavgCustom", "xtable.modavgEffect", "xtable.modavgIC", "xtable.modavgPred", "xtable.modavgShrink", "xtable.multComp", "xtable.summaryOD" ] } ], "_rundeps": [ "lattice", "MASS", "Matrix", "nlme", "rbibutils", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "reformulas", "survival", "TMB", "unmarked", "VGAM", 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